These identifiers correspond to the various dynamics users can select
from when setting up a model configuration using the configure_model function.
Dynamics
MBdecay from the following list:
- MM
Michaelis–Menten kinetics
- RMM
Reverse Michaelis-Menten kinetics, as in (Schimel and Weintraub, 2003) and (Sulman et al. 2014)
- ECA
Equilibrium Chemistry Approximation, based on RESOM (Tang and Riley, 2014)
- DD
Density Dependent decomposition (only applicable for MB decay)
- LM
Linear odel, as in (Robertson et al. 2019)
References
Schimel, J. P., and M. N. Weintraub (2003), The implications of exoenzyme activity on microbial carbon and nitrogen limitation in soil: A theoretical model, Soil Biol. Biochem., 35(4), 549–563, doi:10.1016/s0038-0717(03)00015-4
Sulman, B. N., R. P. Phillips, A. C. Oishi, E. Shevliakova, and S. W. Pacala (2014), Microbe-driven turnover offsets mineral-mediated storage of soil carbon under elevated CO2, Nat. Clim. Change, 4(12), 1099–1102, doi:10.1038/nclimate2436.
Tang, J., Riley, W. Weaker soil carbon–climate feedbacks resulting from microbial and abiotic interactions. Nature Clim Change 5, 56–60 (2015). https://doi.org/10.1038/nclimate2438
Robertson, A. D., Paustian, K., Ogle, S., Wallenstein, M. D., Lugato, E., and Cotrufo, M. F.: Unifying soil organic matter formation and persistence frameworks: the MEMS model, Biogeosciences, 16, 1225–1248, https://doi.org/10.5194/bg-16-1225-2019, 2019.